Valentyn Bezshapkin
@valentynbezMD, PhD student in Bioinformatics. Studying massive genomic datasets and producing software to do it better.
Language Breakdown
Lines of code distribution across 19 owned repositories
I-Shaped Developer
I-shapedSpecialist — deep expertise in Jupyter Notebook
Collaboration Network
Global Impact visualization
Repos
90
PRs
0
Growth
+18%
Top Collaborators
No collaborator data yet.
Coding Streak
Contribution activity over the past year
dimitris-karapliafis
@dimitris-karapliafis
fajieyuan
@fajieyuan
Chaitanya Joshi
@chaitjo
UriNeri
@UriNeri
Raymund Hackett
@RayHackett
Top Repositories
The viral taxonomic assignment pipeline
Pipeline for searching and aligning contact maps for proteins, then running DeepFri's GCN.
WDL Workflow for metagenome assembly
CAMDA 2021 winning solution for "Literature AI for Drug Induced Liver Injury" challenge
Compressing protein structures effectively with torsion angles
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
Domain-PFP is a self-supervised method to predict protein functions from the domains
CATH: high-throughput protein structure/function annotations
Open Source Impact
Contributions to external projects
